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1

Mapping the Origins and Expansion of the Indo-European Language Family

Bouckaert, R., Lemey, P., Dunn, M., Greenhill, S. J., Alekseyenko, A. V., Drummond, A. J., Gray, R. D., Suchard, M. A., Atkinson, Q. D.

Journal:

Year:

2012

Language:

english

File:

PDF, 685 KB

english, 2012

2

Temporal and Spatial Distribution of the Microbial Community of Winogradsky Columns

Esteban, David J, Hysa, Bledi, Bartow-McKenney, Casey, Alekseyenko, Alexander V.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.85 MB

english, 2015

3

Altering the Intestinal Microbiota during a Critical Developmental Window Has Lasting Metabolic Consequences

Cox, Laura M., Yamanishi, Shingo, Sohn, Jiho, Alekseyenko, Alexander V., Leung, Jacqueline M., Cho, Ilseung, Kim, Sungheon G., Li, Huilin, Gao, Zhan, Mahana, Douglas, Zárate Rodriguez, Jorge G., Roger

Journal:

Year:

2014

Language:

english

File:

PDF, 7.20 MB

english, 2014

4

Cigarette smoking and the oral microbiome in a large study of American adults

Wu, Jing, Peters, Brandilyn A, Dominianni, Christine, Zhang, Yilong, Pei, Zhiheng, Yang, Liying, Ma, Yingfei, Purdue, Mark P, Jacobs, Eric J, Gapstur, Susan M, Li, Huilin, Alekseyenko, Alexander V, Ha

Journal:

The ISME Journal

Year:

2016

Language:

english

File:

PDF, 1.24 MB

english, 2016

5

PERMANOVA-S: Association test for microbial community composition that accommodates confounders and multiple distances

Tang, Zheng-Zheng, Chen, Guanhua, Alekseyenko, Alexander V.

Journal:

Year:

2016

Language:

english

File:

PDF, 337 KB

english, 2016

6

An assessment of histone-modification antibody quality

Egelhofer, Thea A, Minoda, Aki, Klugman, Sarit, Lee, Kyungjoon, Kolasinska-Zwierz, Paulina, Alekseyenko, Artyom A, Cheung, Ming-Sin, Day, Daniel S, Gadel, Sarah, Gorchakov, Andrey A

Journal:

Nature Structural and Molecular Biology

Year:

2010

Language:

english

File:

PDF, 463 KB

english, 2010

7

Antibiotics in early life alter the murine colonic microbiome and adiposity

Cho, Ilseung, Yamanishi, Shingo, Cox, Laura, Methé, Barbara A., Zavadil, Jiri, Li, Kelvin, Gao, Zhan, Mahana, Douglas, Raju, Kartik, Teitler, Isabel, Li, Huilin, Alekseyenko, Alexander V., Blaser, Mar

Journal:

Year:

2012

Language:

english

File:

PDF, 658 KB

english, 2012

8

Sex and gonadal steroid modulation of pheromone receptor gene expression in the mouse vomeronasal organ

O.V. Alekseyenko, M.J. Baum, J.A. Cherry

Journal:

Year:

2006

Language:

english

File:

PDF, 316 KB

english, 2006

9

Strategic Applications of Gene Expression: From Drug Discovery/Development to Bedside

Jane P. F. Bai, Alexander V. Alekseyenko, Alexander Statnikov…

Journal:

The AAPS Journal

Year:

2013

Language:

english

File:

PDF, 340 KB

english, 2013

10

Community differentiation of the cutaneous microbiota in psoriasis

Alekseyenko, Alexander V, Perez-Perez, Guillermo I, De Souza, Aieska, Strober, Bruce, Gao, Zhan, Bihan, Monika, Li, Kelvin, Methé, Barbara A, Blaser, Martin J

Journal:

Year:

2013

Language:

english

File:

PDF, 508 KB

english, 2013

11

Numerical simulation of the process of airfoil icing in the presence of large supercooled water drops

Prykhodko, O. A., Alekseyenko, S. V.

Journal:

Technical Physics Letters

Year:

2014

Language:

english

File:

PDF, 537 KB

english, 2014

12

Cutaneous microbiome effects of fluticasone propionate cream and adjunctive bleach baths in childhood atopic dermatitis

Gonzalez, Mercedes E., Schaffer, Julie V., Orlow, Seth J., Gao, Zhan, Li, Huilin, Alekseyenko, Alexander V., Blaser, Martin J.

Journal:

Journal of the American Academy of Dermatology

Year:

2016

Language:

english

File:

PDF, 4.63 MB

english, 2016

13

A general framework for association analysis of microbial communities on a taxonomic tree

Tang, Zheng-Zheng, Chen, Guanhua, Alekseyenko, Alexander V., Li, Hongzhe

Journal:

Year:

2016

Language:

english

File:

PDF, 637 KB

english, 2016

14

Drinking alcohol is associated with variation in the human oral microbiome in a large study of American adults

Fan, Xiaozhou, Peters, Brandilyn A., Jacobs, Eric J., Gapstur, Susan M., Purdue, Mark P., Freedman, Neal D., Alekseyenko, Alexander V., Wu, Jing, Yang, Liying, Pei, Zhiheng, Hayes, Richard B., Ahn, Ji

Journal:

Year:

2018

Language:

english

File:

PDF, 4.73 MB

english, 2018

15

Optogenetic Control of Gene Expression in Drosophila

Chan, Yick-Bun, Alekseyenko, Olga V., Kravitz, Edward A., Roman, Gregg

Journal:

Year:

2015

Language:

english

File:

PDF, 3.66 MB

english, 2015

16

Case-control studies of gene-environment interactions. When a case might not be the case

Lobach, Iryna, Sampson, Joshua, Alekseyenko, Alexander, Lobach, Siarhei, Zhang, Li, Lakshmana, Madepalli K.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.34 MB

english, 2018

17

Behavioral correlates of learned aggression in male mice

Natalia N. Kudryavtseva, Natalia P. Bondar, Olga V. Alekseyenko

Journal:

Aggressive Behavior

Year:

2000

Language:

english

File:

PDF, 113 KB

english, 2000

18

Modifying behavioral phenotypes in Fmr1KO mice: genetic background differences reveal autistic-like responses

Corinne M. Spencer, Olga Alekseyenko, Shannon M. Hamilton, Alexia M. Thomas, Ekaterina Serysheva, Lisa A. Yuva-Paylor, Richard Paylor

Journal:

Autism Research

Year:

2011

Language:

english

File:

PDF, 419 KB

english, 2011

19

The growth of a circular hydrorupture crack in an elastic space when a plastic material is forced in

O.P. Alekseyenko, A.M. Vaisman

Journal:

Journal of Applied Mathematics and Mechanics

Year:

1993

Language:

english

File:

PDF, 513 KB

english, 1993

20

Simrank: Rapid and sensitive general-purpose k-mer search tool

Todd Z DeSantis, Keith Keller, Ulas Karaoz, Alexander V Alekseyenko, Navjeet NS Singh, Eoin L Brodie, Zhiheng Pei, Gary L Andersen, Niels Larsen

Journal:

Year:

2011

Language:

english

File:

PDF, 404 KB

english, 2011

21

Causal graph-based analysis of genome-wide association data in rheumatoid arthritis

Alexander V Alekseyenko, Nikita I Lytkin, Jizhou Ai, Bo Ding, Leonid Padyukov, Constantin F Aliferis, Alexander Statnikov

Journal:

Year:

2011

Language:

english

File:

PDF, 797 KB

english, 2011

22

Alpha and beta heterochromatin in polytene chromosome 2 ofDrosophila melanogaster

Dmitry E. Koryakov, Elena S. Belyaeva, Artyom A. Alekseyenko, Igor F. Zhimulev

Journal:

Year:

1996

Language:

english

File:

PDF, 3.40 MB

english, 1996

23

Certain aspects of a two-dimensional problem on the hydraulic fracturing of an elastic medium

O. P. Alekseyenko, A. M. Vaisman

Journal:

Journal of Mining Science

Year:

1999

Language:

english

File:

PDF, 519 KB

english, 1999

24

Phenomenological model of two-layer gel flow in a crack of hydraulic fracturing

O. P. Alekseyenko, A. M. Vaisman

Journal:

Journal of Mining Science

Year:

1999

Language:

english

File:

PDF, 303 KB

english, 1999

25

On one method of determination of filtration losses under hydraulic fracturing

O. P. Alekseyenko, A. M. Vaisman

Journal:

Journal of Mining Science

Year:

2000

Language:

english

File:

PDF, 374 KB

english, 2000

26

Microdissection and sequence analysis of pericentric heterochromatin from theDrosophila melanogastermutantSuppressor of Underreplication

Yuri M. Moshkin, Stepan N. Belyakin, Nikolay B. Rubtsov, Elena B. Kokoza, Artem A. Alekseyenko, Elena I. Volkova, Elena S. Belyaeva, Igor V. Makunin, Pierre Spierer, Igor F. Zhimulev

Journal:

Year:

2002

Language:

english

File:

PDF, 474 KB

english, 2002

27

Dosage compensation and intercalary heterochromatin inXchromosomes ofDrosophila melanogaster

Artyom A. Alekseyenko, Olga V. Demakova, Elena S. Belyaeva, Grigorii F. Makarevich, Irina V. Kotlikova, Rolf Nöthiger, Igor F. Zhimulev

Journal:

Year:

2002

Language:

english

File:

PDF, 199 KB

english, 2002

28

Influence of theSuURgene on intercalary heterochromatin inDrosophila melanogasterpolytene chromosomes

I. Zhimulev, E. Belyaeva, I. Makunin, V. Pirrotta, E. Volkova, A. Alekseyenko, E. Andreyeva, G. Makarevich, L. Boldyreva, R. Nanayev, O. Demakova

Journal:

Year:

2003

Language:

english

File:

PDF, 778 KB

english, 2003

29

The MSL complex levels are critical for its correct targeting to the chromosomes inDrosophila melanogaster

OlgaV. Demakova, IrinaV. Kotlikova, PolinaR. Gordadze, ArtyomA. Alekseyenko, MitziI. Kuroda, IgorF. Zhimulev

Journal:

Year:

2003

Language:

english

File:

PDF, 584 KB

english, 2003

30

DNA underreplication in intercalary heterochromatin regions in polytene chromosomes ofDrosophila melanogastercorrelates with the formation of partial chromosomal aberrations and ectopic pairing

Elena S. Belyaeva, Sergey A. Demakov, Galina V. Pokholkova, Artyom A. Alekseyenko, Tatiana D. Kolesnikova, Igor F. Zhimulev

Journal:

Year:

2006

Language:

english

File:

PDF, 396 KB

english, 2006

31

Dynamic organization of the β-heterochromatin in theDrosophila melanogasterpolyteneXchromosome

D. E. Koryakov, A. A. Alekseyenko, I. F. Zhimulev

Journal:

Molecular Genetics and Genomics

Year:

1999

Language:

english

File:

PDF, 1.51 MB

english, 1999

32

Antitumor and antimetastatic activity of fucoidan, a sulfated polysaccharide isolated from the Okhotsk seaFucus evanescensbrown alga

T. V. Alekseyenko, S. Ya. Zhanayeva, A. A. Venediktova, T. N. Zvyagintseva, T. A. Kuznetsova, N. N. Besednova, T. A. Korolenko

Journal:

Bulletin of Experimental Biology and Medicine

Year:

2007

Language:

english

File:

PDF, 300 KB

english, 2007

33

PhyloChip microarray analysis reveals altered gastrointestinal microbial communities in a rat model of colonic hypersensitivity

T. A. Nelson, S. Holmes, A. V. Alekseyenko, M. Shenoy, T. Desantis, C. H. Wu, G. L. Andersen, J. Winston, J. Sonnenburg, P. J. Pasricha, A. Spormann

Journal:

Neurogastroenterology & Motility

Year:

2011

Language:

english

File:

PDF, 507 KB

english, 2011

34

Altered anxiety-related and social behaviors in the Fmr1 knockout mouse model of fragile X syndrome

C. M. Spencer, O. Alekseyenko, E. Serysheva, L. A. Yuva-Paylor, R. Paylor

Journal:

Genes, Brain and Behavior

Year:

2005

Language:

english

File:

PDF, 135 KB

english, 2005

35

The RAG2 C terminus suppresses genomic instability and lymphomagenesis

Deriano, Ludovic, Chaumeil, Julie, Coussens, Marc, Multani, Asha, Chou, YiFan, Alekseyenko, Alexander V., Chang, Sandy, Skok, Jane A., Roth, David B.

Journal:

Year:

2011

Language:

english

File:

PDF, 759 KB

english, 2011

36

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

Kharchenko, Peter V., Alekseyenko, Artyom A., Schwartz, Yuri B., Minoda, Aki, Riddle, Nicole C., Ernst, Jason, Sabo, Peter J., Larschan, Erica, Gorchakov, Andrey A., Gu, Tingting

Journal:

Year:

2010

Language:

english

File:

PDF, 976 KB

english, 2010

37

Sequence-specific targeting of MSL complex regulates transcription of the roX RNA genes

Bai, Xiaoying, Alekseyenko, Artyom A, Kuroda, Mitzi I

Journal:

The EMBO Journal

Year:

2004

Language:

english

File:

PDF, 388 KB

english, 2004

38

Dosage compensation in drosophila: Sequence-specific initiation and sequence-independent spreading of MSL complex to the active genes on the male X chromosome

Andrey A. Gorchakov, Artyom A. Alekseyenko, Peter V. Kharchenko, Peter J. Park, Mitzi I. Kuroda

Journal:

Russian Journal of Genetics

Year:

2010

Language:

english

File:

PDF, 206 KB

english, 2010

39

Features of the Genetically Defined Anxiety in Mice

Damira F. Avgustinovich, Tatiana V. Lipina, Natalia P. Bondar, Olga V. Alekseyenko, Natalia N. Kudryavtseva

Journal:

Behavior Genetics

Year:

2000

Language:

english

File:

PDF, 39 KB

english, 2000

40

Increase in Expression of Brain Serotonin Transporter and Monoamine Oxidase A Genes Induced by Repeated Experience of Social Defeats in Male Mice

M. L. Filipenko, A. G. Beilina, O. V. Alekseyenko, V. V. Dolgov, N. N. Kudryavtseva

Journal:

Biochemistry (Moscow)

Year:

2002

Language:

english

File:

PDF, 116 KB

english, 2002

41

Intercalary Heterochromatin inDrosophila MelanogasterPolytene Chromosomes and the Problem of Genetic Silencing

Igor F. Zhimulev, Elena S. Belyaeva, Igor V. Makunin, Vincenzo Pirrotta, Valery F. Semeshin, Artyom A. Alekseyenko, Stepan N. Belyakin, Elena I. Volkova, Dmitry E. Koryakov, Evgeniya N. Andreyeva, Olg

Journal:

Year:

2003

Language:

english

File:

PDF, 246 KB

english, 2003

42

The genomic binding sites of a noncoding RNA

Simon, M. D., Wang, C. I., Kharchenko, P. V., West, J. A., Chapman, B. A., Alekseyenko, A. A., Borowsky, M. L., Kuroda, M. I., Kingston, R. E.

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 929 KB

english, 2011

43

Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty

Baele, G., Lemey, P., Bedford, T., Rambaut, A., Suchard, M. A., Alekseyenko, A. V.

Journal:

Molecular Biology and Evolution

Year:

2012

Language:

english

File:

PDF, 264 KB

english, 2012

44

Nature and function of insulator protein binding sites in the Drosophila genome

Schwartz, Y. B., Linder-Basso, D., Kharchenko, P. V., Tolstorukov, M. Y., Kim, M., Li, H.-B., Gorchakov, A. A., Minoda, A., Shanower, G., Alekseyenko, A. A., Riddle, N. C., Jung, Y. L., Gu, T., Plache

Journal:

Genome Research

Year:

2012

Language:

english

File:

PDF, 3.22 MB

english, 2012

45

Nitrite Mediated Neuroprotection and Signaling after Cardiac Arrest

Cameron Dezfulian, Aleksey Alekseyenko, Joshua M Hare, Miguel A Perez-Pinzon

Journal:

Free Radical Biology and Medicine

Year:

2010

Language:

english

File:

PDF, 385 KB

english, 2010

46

Normalization and experimental design for ChIP-chip data

Shouyong Peng, Artyom A Alekseyenko, Erica Larschan, Mitzi I Kuroda, Peter J Park

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.39 MB

english, 2007

47

A Sequence Motif within Chromatin Entry Sites Directs MSL Establishment on the Drosophila X Chromosome

Artyom A. Alekseyenko, Shouyong Peng, Erica Larschan, Andrey A. Gorchakov, Ok-Kyung Lee, Peter Kharchenko, Sean D. McGrath, Charlotte I. Wang, Elaine R. Mardis, Peter J. Park, Mitzi I. Kuroda

Journal:

Year:

2008

Language:

english

File:

PDF, 1.27 MB

english, 2008

48

MSL Complex Is Attracted to Genes Marked by H3K36 Trimethylation Using a Sequence-Independent Mechanism

Erica Larschan, Artyom A. Alekseyenko, Andrey A. Gortchakov, Shouyong Peng, Bing Li, Pok Yang, Jerry L. Workman, Peter J. Park, Mitzi I. Kuroda

Journal:

Year:

2007

Language:

english

File:

PDF, 2.03 MB

english, 2007

49

Nitrite therapy is neuroprotective and safe in cardiac arrest survivors

Cameron Dezfulian, Aleksey Alekseyenko, Kunjan R. Dave, Ami P. Raval, Rose Do, Francis Kim, Miguel A. Perez-Pinzon

Journal:

Year:

2012

Language:

english

File:

PDF, 983 KB

english, 2012

50

Bilateral damage to the sexually dimorphic medial preoptic area/anterior hypothalamus of male ferrets causes a female-typical preference for and a hypothalamic Fos response to male body odors

Olga V. Alekseyenko, Patricia Waters, Huiquan Zhou, Michael J. Baum

Journal:

Physiology & Behavior

Year:

2007

Language:

english

File:

PDF, 1.34 MB

english, 2007